TreeTime
stable
  • Installation
  • TreeTime command line usage
  • Detailed command line documentation
  • API documentation
    • TreeTime class documentation
    • ClockTree class documentation
    • TreeAnc class documentation
    • Sequence evolution and generation
    • GTR class documentation
    • Coalescent class documentation
    • VCF Utilities
    • Sequence Utilities
    • Core classes
      • TreeTime class
      • ClockTree class
      • TreeAnc class
      • SeqGen class
      • GTR class
      • Coalescent class
    • Utility code
      • VCF tools
      • Seq tools
TreeTime
  • API documentation
  • Edit on GitHub

API documentation

Core classes

TreeTime class

ClockTree class

TreeAnc class

SeqGen class

GTR class

Coalescent class

Utility code

VCF tools

Seq tools

Previous Next

© Copyright 2017-2021, Pavel Sagulenko and Richard Neher. Revision 9fdceaa5.

Built with Sphinx using a theme provided by Read the Docs.